BOOK CHAPTER

Capacity Building and Community Preparedness Towards Landslide Disaster in Pagerharjo Village, Kulon Progo Regency of Yogyakarta, Indonesia. [2020].
(1) Ir. Hendy Setiawan, S.T., M.Eng., Ph.D.. IPM. (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (3) THEMA ARRISALDI (4) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM.

BUKU

Budi Daya dan Potensi Telang Untuk Industri. [2024].
(1) Prof. Dr. Kumala Dewi, M.Sc.St. (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Bahan Ajar Mikrobiologi. [2017].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) Sari Darmasiwi, S.Si., M.Biotech., Ph.D. (3) Dr. rer. nat. Abdul Rahman Siregar, S.Si., M.Biotech.

KEKAYAAN INTELEKTUAL

Klasifikasi Taksonomi Numerik Fenetik Pada Bakteri. [2021].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) Dr. Miftahul Ilmi, S.Si., M.Si. (3) Dr. rer. nat. Abdul Rahman Siregar, S.Si., M.Biotech. (4) Sari Darmasiwi, S.Si., M.Biotech., Ph.D. (5) Arief Muammar, S.Si., M.Sc. (6) Dr. Aprilia Sufi Subiastuti, S.Si.

Pembuatan Medium Nutrient Agar (NA) Dan Nutrient Broth (NB). [2021].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) Dr. Miftahul Ilmi, S.Si., M.Si. (3) Dr. rer. nat. Abdul Rahman Siregar, S.Si., M.Biotech. (4) Sari Darmasiwi, S.Si., M.Biotech., Ph.D. (5) Arief Muammar, S.Si., M.Sc. (6) Dr. Aprilia Sufi Subiastuti, S.Si.

PROSIDING

Combination of Mollase and Glucose as Substrate for The Production of Biosurfactant by Bacillus subtilis BK7. 1. [2024].
(2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (3) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM. (4) Prof. Dr. Suwarno Hadisusanto, S.U.

Optimization Extracellular Lipase Activity from Moraxella sp SBE01 for Hydrocarbons Nanoremediation. [2020].
(1) SITI SOLEHA (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Characterization of Biosurfactant Production by Klebsiella variicola BF1 for Hydrocarbon Degradation Enhancement. [2020].
(1) ANNISAA WIDYASARI (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM. (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Biocatalysts Characters of Novel Bacteria from Crude Oil-Contaminated River. [2020].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) MOCH FATHI RIZQULLAH (3) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM.

Biochemical and Microbial Change in Food Fermentation Ubi Karet Busuk Sumba, East Nusa Tenggara, Indonesia. [2019].
(1) PERISKILA DINA K K (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Symbiotic Performance of Several Leguminous Plants with Legume Nodule Bacteria Isolated from Siratro (Macroptilium atropurpureum) at Mount Merapi Eruption, Indonesia. [2019].
(1) ZEN LADESTAM SIALLAGAN (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (3) Prof. Ir. Irfan Dwidya Prijambada, M.Eng., Ph.D.

The Ethnobotany and Taxonomy Study of the Jamur Selo (Nostoc commune Vaucher ex Bornet & Flahault) Potentially as a Source of Single Cell Protein from Gunungkidul, Daerah Istimewa Yogyakarta. [2017].
(1) Ludmilla Fitri Untari, S.Si., M.Si. (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (4) Drs. Sutikno, S.U.

Edible biofilm formation from guava seed waste fermentation. [2017].
(1) Sari Darmasiwi, S.Si., M.Biotech., Ph.D. (2) Oktaviana Herawati (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Performance and bacterial composition of anodic biofilms in microbial fuel cell using dairy wastewater. [2016].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM.

Molecular identification and optimization culture conditions of amylase producing bacteria isolated from green algae in the coast side of Southern Sea, Yogyakarta, Indonesia. [2016].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) Prof. Dr. Yekti Asih Purwestri, S.Si., M.Si.

Screening of alpha-glucosidase inhibitor-producing lactic acid bacteria from Ganoderma lucidum. [2015].
(4) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (5) Prof. Drs. Langkah Sembiring, M.Sc., Ph.D.

Hidrocarbonoclastic Bacteria from Lapindo Mud, Sidoarjo.. [2009].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Fungal diversity inside the semuluh cave, Semanu, Gunung Kidul, Yogyakarta. [2009].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

PUBLIKASI JURNAL

Production and characterization of lactic acid bacteria biofilms synthesized using tofu wastewater. [2025].
(3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Rhizospheric actinomycetes from turmeric (Curcuma longa L.): Isolation, detection of the biosynthetic gene clusters, and anticancer activity against T47D cancer cells. [2025].
(1) ANISKA NOVITA SARI (6) Dr.biol.hom. Nastiti Wijayanti, S.Si., M.Si. (7) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Detection of Antibacterial Susceptible Salmonella spp. in Cured Beef with Different Shelf-Life Expectancy. [2024].
(2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Degradation of diesel fuel by Pseudomonas aeruginosa B031 with expression of the alkB gene in a column bioreactor. [2024].
(1) Pieter Jhon Joshua Daris (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM. (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (4) Dr.rer.nat. Ir. I Wayan Warmada, IPM.

Black-Pigmented Marine Pseudomonas aeruginosa Exhibiting Anti-Bacterial Activity against Multidrug-Resistant (MDR) Wound Infection Bacteria. [2024].
(1) Muhammad Evy Prastiyanto (2) Sri Darmawati (3) Budi Setiadi Daryono (4) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Computational Prediction of Cinnamomum zeylanicum Bioactive Compounds as Potential Antifungal by Inhibit Biofilm Formation of Candida albicans. [2024].
(1) vita meylani (2) RINALDI RIZAL PUTRA (4) Muhammad Miftahussurur (7) Budi Setiadi Daryono (8) Prof. dr. Tri Wibawa, Ph.D., Sp.MK(K) (9) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Antibacterial Activity of Yellow Pigment from Micrococcus flavus AK 11 Isolates of the Coral Porites sp. from Gosong Beach, Central Java, Indonesia. [2024].
(1) Muhammad Evy Prastiyanto (2) Sri Darmawati (3) Budi Setiadi Daryono (4) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

EFEKTIVITAS DAN KUALITAS PRODUK FERMENTASI KOMBUCHA DENGAN KOMBINASI SUBSTRAT TEH DAUN SUKUN (Artocarpus altilis (Parkinson) Fosberg) DAN LEMON (Citrus limon (L.) Burm. f.). [2023].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Anti-MDR bacterial activity of bacteria associated with sea sponge of Amphimedon sp. from Karimunjawa Island, Central Java, Indonesia. [2023].
(2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Inhibition of Protease Activity and Anti‐quorum Sensing of The Poten‐tial Fraction of Ethanolic Extract from Sansevieria trifasciata Prain Leaves Against Pseudomonas aeruginosa. [2023].
(1) WHIKA FEBRIA D. (2) Prof. Dr. Laurentius Hartanto Nugroho, M.Agr. (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (4) Prof. Dr. Yekti Asih Purwestri, S.Si., M.Si.

Assessment and Bioremediation of Mercury Pollutants by Highly Mercury-Resistant Bacteria Immobilized in Biochar from Small-Scale Artisanal Gold Mining Areas. [2023].
(1) DEWI NURSAIDAH R (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Lactobacillus Composed Urinary Microbiome of Healthy People and Urinary Tract Infection Patients. [2022].
(1) FITRI NADIFAH (2) Prof. Dr. drh. Wayan Tunas Artama (3) Prof. Dr. Budi S. Daryono, M.Agr.Sc. (4) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

The diversity and susceptibility against antibiotics of Salmonella spp. clinical isolates from Yogyakarta, Indonesia. [2022].
(1) ENI KURNIATI (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (3) Dr.biol.hom. Nastiti Wijayanti, S.Si., M.Si. (4) Prof. dr. Tri Wibawa, Ph.D., Sp.MK(K)

Literature Review and Experiment: Diversity of Bacteria in Forest, Revegetated Post-Mining Land, and Active Tin Mining with A Metagenomic Approach. [2022].
(1) EKA SARI (2) Prof. Dr. rer. nat. Andhika Puspito Nugroho, S.Si., M.Si. (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (4) Prof. Ir. Irfan Dwidya Prijambada, M.Eng., Ph.D.

Characterization of The Urogenital Microbiome in Patients with Urinary Tract Infections. [2022].
(1) FITRI NADIFAH (2) Prof. Dr. drh. Wayan Tunas Artama (3) Prof. Dr. Budi S. Daryono, M.Agr.Sc. (4) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Pengaruh Mutasi Terhadap Aktivitas Bioleaching Mangan Bakteri Pengoksidasi Sulfur. [2022].
(1) MUHAMMAD ZULFIKRIE (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM. (3) Dr.rer.nat. Ir. I Wayan Warmada, IPM. (4) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Antibacterial and Anti-biofilm of Secondary Metabolites from Sansevieria trifasciata Leaves Against Pseudomonas aeruginosa. [2022].
(1) WHIKA FEBRIA D. (2) Prof. Dr. Laurentius Hartanto Nugroho, M.Agr. (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (4) Prof. Dr. Yekti Asih Purwestri, S.Si., M.Si.

Pengaruh Penambahan Kacang Hijau (Vigna radiata (L.) R. Wilczek) pada Fermentasi Susu oleh Lactococcus lactis NBRC 12007. [2022].
(1) RARAS AHLUL WIDAWATI (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Antibacterial activity of clove (Syzygium aromaticum) and cinnamon (Cinnamomum burmannii) essential oil against extended-spectrum β-lactamase-producing bacteria. [2021].
(1) ELGIO VENANDA G (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (3) drh. Dyah Ayu Widiasih, Ph.D.

Enhancement of manganese extraction in a biochar-enriched bioleaching column with a mixed culture of indigenous bacteria. [2021].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM. (3) Dr.rer.nat. Ir. I Wayan Warmada, IPM.

Isolation of Cellulolytic Microbes from Bio-Slurry. [2021].
(1) Arief Muammar, S.Si., M.Sc. (2) Maria Manullang (3) MESHA ARJUNA (4) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

The potency of Sansevieria trifasciata and S.cylindrica leaves extracts as an antibacterial against Pseudomonas aeruginosa. [2021].
(1) WHIKA FEBRIA D. (2) Prof. Dr. Laurentius Hartanto Nugroho, M.Agr. (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (4) Prof. Dr. Yekti Asih Purwestri, S.Si., M.Si.

KEMAMPUAN FERMENTASI BAL DENGAN SUBSTRAT SUSU KACANG MERAH. [2020].
(1) LUTHFIANA INDAH HASTUTI (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Bioleaching Ability of Fungi Isolated from an Indonesian Sulfurous River Sediment. [2020].
(1) SERAFICA BTARI C K (2) Dr.rer.nat. Ir. I Wayan Warmada, IPM. (3) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM. (4) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Molecular characterization of lactic acid bacteria producing edible biofilm isolated from kimchi. [2020].
(1) FADILLA SAPALINA (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Activities and molecular characterization of petroleum hydrocarbons degrading rhizobacteria from mangrove plants (Rhizophora sp.) in Kulon Progo, Yogyakarta, Indonesia. [2020].
(1) VIVEKANANDA V BENGET (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

THE PERFORMANCE OF A FIXED-BED ANAEROBIC BIOREACTOR USING SULFATE-REDUCING BACTERIAL CONSORTIUM FROM SIKIDANG CRATER SEDIMENTS. [2020].
(1) Andriyanto (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM. (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Hydrocarbon degradation by bacteria from rhizospheres of Imperata cylindrica at oil mining site in Wonocolo, Bojonegoro, Indonesia. [2019].
(1) MUTIARA ARUM SARI (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Chromium Precipitation Activity and Molecular Characterization of Sulfate-Reducing Bacteria. [2019].
(1) DWIANA MUFLIHAH Y (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (3) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM.

Dynamic Population Analysis of Microalga with Metabarcoding Study in Consortium Microalga-Bacteria Isolated From Glagah Beach Yogyakarta Using Next Generation Sequencing (NGS) Method. [2019].
(1) ANDI ALFI SYAHRIN (2) AHMAD ARDI (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (4) Dr. Miftahul Ilmi, S.Si., M.Si. (5) Prof. Dr.Eng. Ir. Arief Budiman, M.S., IPU. (6) Dr. Eko Agus Suyono, S.Si., M.App.Sc.

Identification and Antimicrobial Activity of Lactic Acid Bacteria from The Digestive Tract of Eels (Monopterus albus). [2019].
(2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (4) Prof. Dr. Budi S. Daryono, M.Agr.Sc. (5) Dr. Miftahul Ilmi, S.Si., M.Si.

Pyrolusite Bioleaching by an Indigenous Acidithiobacillus sp KL3 Isolated from an Indonesian Sulfurous River Sediment. [2019].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM.

Optimization of manganese bioleaching activity and molecular characterization of indigenous heterotrophic bacteria isolated from the sulfuric area. [2019].
(1) DENAYA ANDRYA P (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM. (3) Dr.rer.nat. Ir. I Wayan Warmada, IPM. (4) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Isolation and Molecular Identification of Antimicrobial-Producing Lactic Acid Bacteria from Chao, South Sulawesi (Indonesia) Fermented Fish Product. [2019].
(1) RISKY NURHIKMAYANI (2) Prof. Dr. Budi S. Daryono, M.Agr.Sc. (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

PRODUCTION AND CHARACTERIZATION OF BIOSURFACTANTS PRODUCED BY Pseudomonas aeruginosa B031 ISOLATED FROM A HYDROCARBON PHYTOREMEDIATION FIELD. [2018].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM.

Bacterial Symbionts Isolated from Mixed Microalgae Culture of Glagah Strains. [2018].
(1) Dr. Eko Agus Suyono, S.Si., M.App.Sc. (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (3) Nur Ajijah

ISOLASI DAN IDENTIFIKASI BAKTERI Vibrio sp. PADA KERANG KAPAH (Meretrix meretrix) DI KABUPATEN TRENGGALEK. [2017].
(1) Burhanuddin Ihsan (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Preliminary Study of Liquid Hydrocarbon Biodegradation By Indigenous Bacteria Isolated from Wonocolo Village, Bojonegoro District, East Java Province. [2017].
(1) BRAMONO DWI KUSUMO (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM. (3) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Removal of Sulphate and Manganese on Synthetic Wastewater in Sulphate Reducing Bioreactor Using Indonesian Natural Zeolite. [2017].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) Prof. Dr.Eng. Ir. Wahyu Wilopo S.T., M.Eng., IPM.

Effect of Biofertilizer Addition on Nitrous Oxide Emission. [2014].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (2) Prof. Ir. Irfan Dwidya Prijambada, M.Eng., Ph.D. (3) Prof. Dra. Sukarti Moeljopawiro M.App.Sc., Ph.D. (4) Prof. Dr. Budi S. Daryono, M.Agr.Sc.

PENGARUH TINGGI DAN LAMA PENGGENANGAN TERHADAP PERTUMBUHAN PADI KULTIVAR SINTANUR DAN DINAMIKA POPULASI RHIZOBAKTERI PEMFIKSASI NITROGEN NON SIMBIOSIS. [2013].
(1) Prof. Dr. Diah Rachmawati, S.Si., M.Si. (2) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.

Activity of Immobilized and Free Î±-Amylase from Zoogloea ramigera ABL 1 on Liquid Starch Medium using Treatment of Environmental Factors. [2011].
(1) Prof. Dr. Endah Retnaningrum, S.Si., M.Eng.