Dynamic Population Analysis of Microalga with Metabarcoding Study in Consortium Microalga-Bacteria Isolated From Glagah Beach Yogyakarta Using Next Generation Sequencing (NGS) Method
Penulis/Author
ANDI ALFI SYAHRIN (1); AHMAD ARDI (2); Prof. Dr. Endah Retnaningrum, S.Si., M.Eng. (3); Dr. Miftahul Ilmi, S.Si., M.Si. (4); Prof. Dr.Eng. Ir. Arief Budiman, M.S., IPU. (5); Dr. Eko Agus Suyono, S.Si., M.App.Sc. (6)
Tanggal/Date
3 2019
Kata Kunci/Keyword
Abstrak/Abstract
The purpose of this study is to determine the type of microalgae in Glagah isolate culture, including
the dynamics of microalga populations, and types of microalgae that were consistently present in
each phase of growth. Microalgae are single-celled, primary photosynthetic microorganisms that
can be found everywhere, prokaryotic and eukaryotic, which are taxonomically and
phylogenetically diverse. Advanced plant life is now thought to have evolved from this simple
microscopic plant-like organism entity. In general, microalgae are a heterogeneous group of
polypyletic photosynthetic organisms with an estimated 350,000 known species.
Innovation in microalgae cells was an integral part of the process needed to produce biofuels from
microalgae biomass because biofuels produced from microalgae cells were not toxic compared to
fossil fuels. In microalgae cultivation, there were several isolates that can be used, one of which is
Glagah isolate which will be used in this study. The high rate of growth that causes abundant
biomass was possible for a mutually beneficial symbiosis between microalgae and other
microorganisms. In many metagenomic and metabarcoding studies use the Next Generation
Sequencing (NGS) method to obtain phylogenetic dynamics and population dynamics. Data analysis
uses the QIIME2 pipeline that was accessed through Linux terminal. Eight types of microalgae were
found in the Isolate Glagah consortium culture which was dominated by members of the
Archaeplastida phylum. Archaeplastida phylum has the highest relative abundance in each phase of
microalgae growth in sample T and sample A. Changes in the abundance of microalgae in each
phase of growth shows that microalgae communities are dynamic depending on environmental
conditions which in this case are influenced by bacterial growth.
Keywords: Metabarcoding, next generation sequencing, Glagah isolate, QIIME2.
Rumpun Ilmu
Biologi (dan Bioteknologi Umum)
Bahasa Asli/Original Language
English
Level
Internasional
Status
Dokumen Karya
No
Judul
Tipe Dokumen
Aksi
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SUYONO2011-122019PCBMB6520.pdf
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Dynamic Population Analysis of Microalga with Metabarcoding Study in Consortium Microalga-Bacteria Isolated From Glagah Beach Yogyakarta Using Next Generation Sequencing (NGS) Method.pdf
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