RNA-seq data of tea mosquito bugs, Helopeltis bradyi, antennae
Penulis/Author
Alan Soffan, S.P., M.Sc., Ph.D. (1); Prof. Dr. Ir. Siti Subandiyah, M.Agr.Sc. (2); Dr. Ir. Arman Wijonarko, M.Sc. (3); Widhi Dyah Sawitri, S.Si., M.Agr., Ph.D. (4)
Tanggal/Date
13 2021
Kata Kunci/Keyword
Abstrak/Abstract
Tea Mosquito Bug (TMB), Helopeltis bradyi (Hemiptera: Miridae) is one of the major pest infesting tea and cocoa plantations worldwide. Developing olfaction-based control methods was urges as an alternative to commonly used but non-environmental friendly chemical pesticides. However, the molecular mechanisms underlying TMB reception mechanism are still lacking. Here, we collected a pooled male and female TMB antennae for RNA extraction followed by sequencing using the BGISEQ-500 platform and de novo assembly. TMB antennae RNA-seq data yielded 32,142 unigenes with N50 and GC (%) were 2322 and 40.25; subsequently. The RNA-seq data are available in GenBank Sequence Read Archive (SRA) database with accession number SRR13327229. De novo transcriptome analysis had identified several genes involved in TMB odorant reception includes; 39 OBPs (odorant binding proteins), 10 CSPs (chemosensory proteins), 81 Ors (odorant receptors), 1 Orcos (co-receptors), 9 SNMPs (sensory neuron membrane proteins), 3 GRs (gustatory receptors) and 4 IRs (ionotropic receptors). Our study presents the first RNA seq for TMB antennae, which serve the primary molecular resources data, which will facilitate further research to develop olfaction-based control methods, potentially contribute to TMB management strategies.
Rumpun Ilmu
Ilmu Hama dan Penyakit Tanaman
Bahasa Asli/Original Language
English
Level
Internasional
Status
Dokumen Karya
No
Judul
Tipe Dokumen
Aksi
1
Acceptance DIB 2021.pdf
Bukti Accepted
2
form-L1-Alan SOffan2021_DIB.pdf
Dokumen Pendukung Karya Ilmiah (Hibah, Publikasi, Penelitian, Pengabdian)
3
submission proof DIB 2021.pdf
Bukti Submitted
4
Published DIB 2021.pdf
Bukti Published
5
DIB-S-21-00667.pdf
Bukti Draft
6
All Correspondence DIB Alan 2021.pdf
[PAK] Bukti Korespondensi Penulis
7
Cek Similarity_RNA-seq data of tea mosquito bugs, Helopeltis bradyi, antennae.pdf
