Molecular Insights Into the Identification and Phylogenetic of the Collector Urchin, Tripneustes gratilla (Linnaeus 1758) From the Red Island Beach, East Java, Indonesia
Penulis/Author
Drs. Namastra Probosunu, M.Si. (1); Eko Hardianto, S.Pi., M.Si., M.Sc., Ph.D (2); Dr. Ratih Ida Adharini, S.Pi., M.Si. (3); Tony Budi Satriyo, S.Pi., M.Sc., Ph.D. (4); Dr. Eko Setyobudi, S.Pi., M.Si. (5); Ulung Jantama Wisha, S.Kel., M.Sc. (6); Dio Dirgantara (7)
Tanggal/Date
23 2025
Kata Kunci/Keyword
Abstrak/Abstract
The collector urchin, Tripneustes gratilla is an ecologically crucial sea urchin community with typical habitats consisting of shallow seagrass beds or reefs. Samples were obtained from the Red Island Beach, Banyuwangi Regency, East Java, Indonesia. Nucleotide sequencing analysis was conducted on mitochondrial cytochrome oxidase subunit I (coi) DNA fragments amplified by PCR. Nucleotide sequences ranging from 605 to 606 base pairs were collected from 16 specimens at the sample site. Through DNA barcoding analysis, it was determined that all samples are of the Tripneustes gratilla species. Phylogenetic studies were conducted by comparing the gene sequences of the collecting urchin haplotypes identified in this study with gene sequences of identical base pair length from GenBank and T. ventricosus, which served as the reference group. The phylogenetic trees exhibited good consistency and clearly delineated distinct clades for each species. Phylogenetic status of haplotype and the existence of sea urchins were documented. The clarification of the evolutionary position of ecologically important species offers fundamental information for potential future conservation efforts of such species.
Rumpun Ilmu
Bidang Perikanan Lain Yang Belum Tercantum
Bahasa Asli/Original Language
English
Level
Internasional
Status
Dokumen Karya
No
Judul
Tipe Dokumen
Aksi
1
form-L1-Eko Hardianto-EJABFS-2025.pdf
Dokumen Pendukung Karya Ilmiah (Hibah, Publikasi, Penelitian, Pengabdian)
2
EJABF_Volume 29_Issue 1_Pages 2431-2443.pdf
[PAK] Full Dokumen
3
Similarity Molecular Insights Into the Identification and Phylogenetic of the Collector Urchin, Tripneustes gratilla (Linnaeus 1758) .pdf
[PAK] Cek Similarity
4
Bukti Koerspondensi Artikel Probosunu et al_, 2025.pdf